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5 fewer sets in 4DN-only Data.
 

Properties

Sample Type
Sample Category
Sample
Warnings
16 Common Properties
 Project
External
 Lab
Giacomo Cavalli, UM
 Experiment Category
Sequencing
 Experiment Type
in situ Hi-C
 Organism
Mouse
 Sample Tier
Unclassified
 Organ/System
No value
 Tissue Source
stem cell
 Publication
Bonev B et al. (2017) PMID:29053968
 Modifications
No value
 Treatments
No value
 Assay Details
Enzyme: DpnII
 Center
External
 Status
Released
 Commendations
No value
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
in situ Hi-C
mESC line with Oct4-GFP
Hi-C on mESC during neural differentiation
control cells, selected for G0G1, but not GFP on Oct4-GFP cells
Enzyme
DpnII
in situ Hi-C
mESC line with Oct4-GFP
Hi-C on mESC during neural differentiation
control cells, selected by Oct4-GFP+, but not GOG1 on Oct4-GFP cells
Enzyme
DpnII
in situ Hi-C
mESC line with Oct4-GFP
Hi-C on mESC during neural differentiation
control cells, unsorted Oct4-GFP cells
Enzyme
DpnII
in situ Hi-C
46C with Sox1-GFP
Hi-C on mESC during neural differentiation
G0G1 neural progenitors cells (FACS sorted, Sox1-GFP+)
Enzyme
DpnII
in situ Hi-C
mESC line with Oct4-GFP
Hi-C on mESC during neural differentiation
G0G1 mESCs (FACS sorted, Oct4-GFP+)
Enzyme
DpnII
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