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3 fewer sets in 4DN-only Data.
 

Properties

Treatments
19 Common Properties
 Project
External
 Lab
Benoit Bruneau, UCSF
 Experiment Category
Sequencing
 Experiment Type
Dilution Hi-C
 Organism
Mouse
 Sample Type
stem cells
 Sample Tier
Unclassified
 Sample Category
Mouse stem cell
 Sample
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
 Organ/System
No value
 Tissue Source
stem cell
 Publication
Nora EP et al. (2017) PMID:28525758
 Modifications
No value
 Assay Details
Enzyme: HindIII
 Center
External
 Status
Released
 Commendations
No value
 Warnings
Biosample Metadata Incomplete
 Validation Errors
No value
Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
CTCF-depletion by auxin treatment followed by 24h wash-off
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
CTCF-depleted by auxin treatment
Enzyme
HindIII
Dilution Hi-C
ES-E14TG2a with random integration of EGFP and AID-tagged CTCF, Tir1 insertion
Hi-C on CTCF-AID tagged mESCs
WT - untreated
Enzyme
HindIII
- fin -