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359 fewer sets in 4DN-only Data.
 

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1 Common Properties
 Validation Errors
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Title
Experiment Type
Biosample
Dataset
Condition
Assay Details
Lab
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
6 syn non-boundary CTCF sites - input
Target
None (Control)
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
15 syn non-boundary CTCF sites - input
Target
None (Control)
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
15 syn non-boundary CTCF sites - anti-Rad21
Target
Rad21 mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
6 syn non-boundary CTCF sites - anti-Rad21
Target
Rad21 mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
15 syn non-boundary CTCF sites - anti-CTCF
Target
Ctcf mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
6 syn non-boundary CTCF sites - anti-CTCF
Target
Ctcf mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
4 CBS (4 CTCF binding site region between Sox2 and SE) - input
Target
None (Control)
ChIP-seq
F123-CASTx129 with Sox2 tags
ChIP-seq on tagged Sox2 cells
Control line - input
Target
None (Control)
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
4 CBS (4 CTCF binding site region between Sox2 and SE) - anti-CTCF
Target
Ctcf mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
4 CBS (4 CTCF binding site region between Sox2 and SE) - anti-H3K4me3
Target
H3K4me3
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
4 CBS (4 CTCF binding site region between Sox2 and SE) - anti-H3K27ac
Target
H3K27ac (mouse)
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
4 CBS (4 CTCF binding site region between Sox2 and SE) - anti-Rad21
Target
Rad21 mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags
ChIP-seq on tagged Sox2 cells
Control line - anti-CTCF
Target
Ctcf mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags
ChIP-seq on tagged Sox2 cells
Control line - anti-H3K27ac
Target
H3K27ac (mouse)
ChIP-seq
F123-CASTx129 with Sox2 tags
ChIP-seq on tagged Sox2 cells
Control line - anti-Rad21
Target
Rad21 mouse protein
ChIP-seq
F123-CASTx129 with Sox2 tags
ChIP-seq on tagged Sox2 cells
Control line - anti-H3K4me3
Target
H3K4me3
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
6 syn CTCF sites - input
Target
None (Control)
ChIP-seq
F123-CASTx129 with Sox2 tags and RMCE site between Sox2 and its SE
ChIP-seq on tagged Sox2 cells
6 syn CTCF sites - anti-CTCF
Target
Ctcf mouse protein
ChIP-seq